Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015902410.1_cds_XP_016452444.1_46687
CDS Infomation

[gene=LOC107776996] [db_xref=GeneID:107776996] [protein=premnaspirodiene oxygenase-like] [protein_id=XP_016452444.1] [location=join(45921..46820,47633..48253)] [gbkey=CDS]
Sequence

ATGGAATCAGTTTTTCTTGAAGAATTTAGTCCATTGAAACTAATCAAAATCTCCATATTC
CCCTTTATAATCCTCATCTTCTTACAACTCTGGAGTTTGAAGAAAAAAACCAAACTTCCT
CCTGGTCCAACAAAATTACCTTTCATTGGCAATTTAAACCAATTAATGACCCCAACACCC
CACAAAAAATTAAGGGATTTGGCCTTAAAATATGGTCCTTTAATGTACCTAAAACTTGGT
ATGGTGCCAACAATTGTTGTATCATCTGCTGATGCTGCTGAGAAAATCTTGAAAACTAAT
GATCTTGCCTTTGCAGGCCGGCCTAAATTAGTCGCGCCAAAGATCTTGGGCTACAATTAT
TCCGATATTGCATTTGCACCTTATGGTACATATTGGAGACAACTAAGAAAAATTTGCATC
CTTGAGCTTCTTAGCTCAAAAAGAGTCAATTCCTTCGCGTCTGCTAGACGCGGGGAGTTG
AATCTGTTTCTTCAATCTATCGCGTCTTCTTGTGGTGGAAAACCTATTAACTTGGCTGAA
ATGTTGTTTGCTTTAAACCATGATATAACTACAAGAATCACATTTGGATGTAAAGCTGAT
GATCAAATAAGATTCAGGGCTGCAACTAAAGAAGGAACAGTATTAGTAAGTGGATTTCAG
ATTGGTGATTTCTTTCCTTCTCTGTCATTTGTTGCTCTTGTCACAGGCATGACATCGAGG
ATACAGAAGATTTTCGTTGAGATGGATGGAATAATTAACAAAATCATCGACGAGCATACT
GAAAGAAACAAAAGAATCAAGCCGGAGCATGAGGATTTACTTGATGTTCTGCTTAGGATT
ATGGAAAATGAAGAACTTGAAGTTCCTTTGACTATTGACAACATCAAGTCTATTTTACTG
GAGATGGTTGTAGCTGGAAGTGAAAATGCTTCAAATTCAGTAGAGTGGGCAATGACAGAG
ATGATCAAGAATCCAAAAGTACTAACTAAAGCACAAGAAGAAGTCAGAAATGTAGTAAAA
GGGAAGCCAACAGTAGAAGAGAATGATCTACACAATCTAAGTTACATCAAAATGGTGATC
AAGGAAACACTAAGATTTCATCCTCCTGTGCCCCTTTTGCTACCAAAAGAGTCGCTGGAA
AATTGCACGGTCGACGACTATGAAATTCCAGCAAATACTAGAGTTTTTATCAACTATTGG
GCAATCTCTAGGGATCCCAAAAGTTGGGAAAATCCTGATATATTTGAGCCTGAAAGGTTT
AAGAATGTAGCAGTGGATTTTAAAGGTCATGATTTTGAGTTTATTCCATTTGGCGCTGGA
AGAAGGATTTGTCCTGGAATTTCCTTTGGGATGTTGAACTTGGAACTTTCATTAGCAGCT
ATGCTTTATCACTTTGATTGGAAGTTACCTCAAGAAATGAAACCACAAGATGTTGATATG
AAAGAAACATTTGGAATGACTCTTTTCAAGACTTCAAGTTTGCATCTTGTTCCTACTCTT
CATTTCCCTGTACCATCCTAA

Peptide Sequence

PEP ID

XP_016452444.1
PEP Infomation

PREDICTED: premnaspirodiene oxygenase-like [Nicotiana tabacum]
Sequence

MESVFLEEFSPLKLIKISIFPFIILIFLQLWSLKKKTKLPPGPTKLPFIGNLNQLMTPTP
HKKLRDLALKYGPLMYLKLGMVPTIVVSSADAAEKILKTNDLAFAGRPKLVAPKILGYNY
SDIAFAPYGTYWRQLRKICILELLSSKRVNSFASARRGELNLFLQSIASSCGGKPINLAE
MLFALNHDITTRITFGCKADDQIRFRAATKEGTVLVSGFQIGDFFPSLSFVALVTGMTSR
IQKIFVEMDGIINKIIDEHTERNKRIKPEHEDLLDVLLRIMENEELEVPLTIDNIKSILL
EMVVAGSENASNSVEWAMTEMIKNPKVLTKAQEEVRNVVKGKPTVEENDLHNLSYIKMVI
KETLRFHPPVPLLLPKESLENCTVDDYEIPANTRVFINYWAISRDPKSWENPDIFEPERF
KNVAVDFKGHDFEFIPFGAGRRICPGISFGMLNLELSLAAMLYHFDWKLPQEMKPQDVDM
KETFGMTLFKTSSLHLVPTLHFPVPS

Transcript Sequence

Gene sequence data has not been registered.